Editing Spectra serial output (section)

== Spectrum_Processing.c ==

&lt;pre&gt;
float tempSpectrum1[SPECTRA_SIZE];
float tempSpectrum2[SPECTRA_SIZE];
float tempSpectrum3[SPECTRA_SIZE];
//gets the spectrum from the FPGA and converts it accordingly (ev, cps, uA) 
//input -- pointer to reading strcuture to put the processed spectrum
//intput --uAps that spectrrum was acquired at
//output -- processed spectrum int he reading strcuture
void processMeasurementSpectrum( float liveTime,volatile STRUCT_READING_DATA* reading, float uAmps,float *spectraSum, bool averagePriorSpectrum)
{
	
	float localLiveTime = liveTime;
	
	
	
	//! don't need to zero out processedSpectrum as the
	//! function below overwrites any data in there
	getFinalSpectrum_float(processedSpectrum,SPECTRA_SIZE);
	for (int i = 0; i &lt; SPECTRA_SIZE; i++)
		tempSpectrum1[i] = processedSpectrum[i];
	
	//Copy the raw spectrum so that we can use it later in the backscatter check
	memcpy(unprocessedSpectrum,processedSpectrum,SPECTRA_SIZE * sizeof(float) );
	
	//convert processedspectrum to cps/uA in ev versus bins	
	convertSpectrumToLive_Ev_Ua( SPECTRA_SIZE,
								stDetParam.stDetSettings[detectorParams.currentShaperSettings].fEscale,
								stDetParam.stDetSettings[detectorParams.currentShaperSettings].fEzero,
								processedSpectrum,
								fEv_per_bin,
								1.0, //pass in 1 here as I do not actually wish to divide by current here
								localLiveTime,
								spectraSum);
	

	//We need somewhere to through the spectra sum or the unprocessed spectrum
	float unprocessedSum;
	
	//We need to convert the unprocessed spectrum seperately, since it will have a different, unaveraged live time
	convertSpectrumToLive_Ev_Ua( SPECTRA_SIZE,
								stDetParam.stDetSettings[detectorParams.currentShaperSettings].fEscale,
								stDetParam.stDetSettings[detectorParams.currentShaperSettings].fEzero,
								unprocessedSpectrum,
								fEv_per_bin,
								1.0, //pass in 1 here as I do not actually wish to divide by current here
								liveTime,
								&amp;unprocessedSum);
	for (int i = 0; i &lt; SPECTRA_SIZE; i++)
		tempSpectrum2[i] = processedSpectrum[i];
	fullSpectrumSumPeakCorrection(SPECTRA_SIZE,processedSpectrum);
	
	removeSpectrumEscapePeak(SPECTRA_SIZE,processedSpectrum);
	for (int i = 0; i &lt; SPECTRA_SIZE; i++)
		tempSpectrum3[i] = processedSpectrum[i];
	
&lt;/pre&gt;